Determining and knowing the RNA secondary structure from sequence data by computational predictions is a long-standing problem. Its solution has…
MicroRNAs are small single stranded RNA molecules of nearly 22 nt in length which play an important role in post…
AutoDep is a web-based system for the deposition and validation of large macromolecular structures including proteins and ligand-binding structures. AutoDep…
PDBeMotif is a highly fast and powerful search tool that facilitates exploration of the Protein Data Bank (PDB) by combining…
DynaMut is a web server using two distinct, well established normal mode approaches, which can be used to analyze and…
The arrival of massively parallel sequencing technologies has fundamentally changed the study of genetics. New platforms like the Illumina HiSeq2000…
SpliceSeq is a visual tool that supports exploration of: A single sample’s transcriptome from RNA-Seq dataA comparative analysis of transcriptomes from…
BLASTx It compares a DNA query to a protein database, by translating the query sequence in the 6 possible frames,…
There have been two members of the BLAST suite of programs that are designed to make nucleotide-to-nucleotide alignments. The first…
The Basic Local Alignment Search Tool (BLAST) finds regions of similarity between sequences. The program compares nucleotide or protein sequences and calculates…